Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ebf1Q07802 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm5257-201ENSMUST00000121823 790 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm22379-201ENSMUST00000157480 131 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Mir6923-201ENSMUST00000184592 72 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.51□□□□□ -0.57
Ebf1Q07802 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm16380-201ENSMUST00000077997 478 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Ebf1Q07802 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.51□□□□□ -0.57
Ebf1Q07802 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ebf1Q07802 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm12247-201ENSMUST00000117585 670 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm13351-201ENSMUST00000118087 414 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm8723-201ENSMUST00000166076 820 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm8701-201ENSMUST00000169259 874 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm19587-201ENSMUST00000191395 545 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm30671-201ENSMUST00000214898 318 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms