Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.24□□□□□ -0.45
Col9a2Q07643 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col9a2Q07643 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.24□□□□□ -0.45
Col9a2Q07643 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.24□□□□□ -0.45
Col9a2Q07643 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.24□□□□□ -0.45
Col9a2Q07643 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm13549-201ENSMUST00000118339 796 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Col9a2Q07643 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm44216-201ENSMUST00000203942 157 ntBASIC12.23□□□□□ -0.45
Col9a2Q07643 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.23□□□□□ -0.45
Col9a2Q07643 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a2Q07643 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Gm12274-201ENSMUST00000120062 385 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Gm13445-201ENSMUST00000121664 307 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Gm28833-201ENSMUST00000189671 559 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.22□□□□□ -0.45
Col9a2Q07643 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms