Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx4Q07424 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm43081-201ENSMUST00000199082 1380 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Cdx4Q07424 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Gm11509-201ENSMUST00000117358 325 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC8.78□□□□□ -1
Cdx4Q07424 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC8.78□□□□□ -1
Cdx4Q07424 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm9192-201ENSMUST00000183221 985 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm5733-201ENSMUST00000190232 939 ntBASIC8.78□□□□□ -1
Cdx4Q07424 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Gm38228-201ENSMUST00000193169 1293 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Gm38117-201ENSMUST00000194653 939 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Gm43916-201ENSMUST00000205062 967 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 AC122876.1-201ENSMUST00000217619 825 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.78□□□□□ -1
Cdx4Q07424 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx4Q07424 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cdx4Q07424 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC8.78□□□□□ -1
Cdx4Q07424 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Cdx4Q07424 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
Cdx4Q07424 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.78□□□□□ -1
Cdx4Q07424 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx4Q07424 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx4Q07424 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC8.77□□□□□ -1
Cdx4Q07424 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx4Q07424 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx4Q07424 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.77□□□□□ -1
Cdx4Q07424 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Cdx4Q07424 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm13263-201ENSMUST00000121271 838 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Cd63-ps-202ENSMUST00000154992 717 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm38114-201ENSMUST00000191877 1232 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm37835-201ENSMUST00000193305 361 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm6450-201ENSMUST00000200896 574 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms