Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm23284-201ENSMUST00000178069 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm25018-201ENSMUST00000179081 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm25212-201ENSMUST00000179432 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm26391-201ENSMUST00000179843 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm5976-201ENSMUST00000180794 996 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox9Q04887 Mir6387-201ENSMUST00000184042 108 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm18552-201ENSMUST00000187425 538 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Sox9Q04887 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm24089-201ENSMUST00000093696 109 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox9Q04887 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox9Q04887 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox9Q04887 Snord23-201ENSMUST00000116828 109 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm16209-201ENSMUST00000118457 627 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm14441-201ENSMUST00000121960 540 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm22344-201ENSMUST00000122642 278 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm10171-201ENSMUST00000126220 628 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox9Q04887 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm25343-201ENSMUST00000157460 107 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm26174-201ENSMUST00000158415 219 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm20493-201ENSMUST00000173706 213 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox9Q04887 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm29543-201ENSMUST00000188138 967 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm20781-201ENSMUST00000193154 693 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm2474-201ENSMUST00000195162 559 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm21736-201ENSMUST00000195399 693 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox9Q04887 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox9Q04887 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm10233-201ENSMUST00000089275 628 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox9Q04887 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox9Q04887 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Sox9Q04887 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox9Q04887 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.74□□□□□ -0.53
Sox9Q04887 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms