Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Shox2P70390 Gm5455-201ENSMUST00000058710 715 ntBASIC11.13□□□□□ -0.63
Shox2P70390 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shox2P70390 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.13□□□□□ -0.63
Shox2P70390 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.12□□□□□ -0.63
Shox2P70390 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 AC121574.1-201ENSMUST00000228770 3132 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Shox2P70390 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shox2P70390 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shox2P70390 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shox2P70390 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shox2P70390 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Shox2P70390 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gm11941-201ENSMUST00000119904 610 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 Gm11918-201ENSMUST00000121660 179 ntBASIC11.12□□□□□ -0.63
Shox2P70390 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gm12091-201ENSMUST00000146791 830 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.12□□□□□ -0.63
Shox2P70390 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gm29127-201ENSMUST00000188304 517 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.12□□□□□ -0.63
Shox2P70390 Rps4l-202ENSMUST00000204242 789 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Gm5705-201ENSMUST00000066241 711 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shox2P70390 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shox2P70390 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.12□□□□□ -0.63
Shox2P70390 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shox2P70390 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.12□□□□□ -0.63
Shox2P70390 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Shox2P70390 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shox2P70390 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shox2P70390 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Gm12015-201ENSMUST00000117065 843 ntBASIC11.11□□□□□ -0.63
Shox2P70390 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.11□□□□□ -0.63
Shox2P70390 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.11□□□□□ -0.63
Shox2P70390 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.11□□□□□ -0.63
Shox2P70390 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Gm8515-201ENSMUST00000194852 576 ntBASIC11.11□□□□□ -0.63
Shox2P70390 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.11□□□□□ -0.63
Shox2P70390 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Shox2P70390 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.11□□□□□ -0.63
Shox2P70390 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms