Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC18.19■□□□□ 0.5
Cux2P70298 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cux2P70298 Gm22994-201ENSMUST00000175422 82 ntBASIC18.19■□□□□ 0.5
Cux2P70298 AC174647.1-201ENSMUST00000227419 1271 ntBASIC18.19■□□□□ 0.5
Cux2P70298 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Gm44831-201ENSMUST00000208469 2989 ntBASIC18.19■□□□□ 0.5
Cux2P70298 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cux2P70298 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC18.18■□□□□ 0.5
Cux2P70298 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cux2P70298 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Gm25694-201ENSMUST00000175448 282 ntBASIC18.18■□□□□ 0.5
Cux2P70298 Gm34248-201ENSMUST00000200027 474 ntBASIC18.18■□□□□ 0.5
Cux2P70298 Gm2716-201ENSMUST00000212350 643 ntBASIC18.18■□□□□ 0.5
Cux2P70298 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cux2P70298 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Cux2P70298 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cux2P70298 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cux2P70298 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Gm15132-201ENSMUST00000118581 652 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Gm8864-201ENSMUST00000118653 1010 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Gm17797-201ENSMUST00000182175 997 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Ighv5-1-201ENSMUST00000193324 353 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Gm2328-201ENSMUST00000193525 535 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC18.17■□□□□ 0.5
Cux2P70298 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cux2P70298 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC18.17■□□□□ 0.5
Cux2P70298 Gm20633-201ENSMUST00000176742 2831 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Gm38034-201ENSMUST00000193915 2069 ntBASIC18.17■□□□□ 0.5
Cux2P70298 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC18.17■□□□□ 0.5
Cux2P70298 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cux2P70298 Gm5766-201ENSMUST00000160520 1977 ntBASIC18.17■□□□□ 0.5
Cux2P70298 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cux2P70298 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cux2P70298 Gm12397-201ENSMUST00000117674 615 ntBASIC18.16■□□□□ 0.5
Cux2P70298 Gm15702-201ENSMUST00000119680 444 ntBASIC18.16■□□□□ 0.5
Cux2P70298 Gm12961-201ENSMUST00000120507 1050 ntBASIC18.16■□□□□ 0.5
Cux2P70298 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cux2P70298 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cux2P70298 Gm5501-201ENSMUST00000165917 832 ntBASIC18.16■□□□□ 0.5
Cux2P70298 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC18.16■□□□□ 0.5
Cux2P70298 Gm18042-201ENSMUST00000219887 790 ntBASIC18.16■□□□□ 0.5
Cux2P70298 Gm8557-201ENSMUST00000220777 475 ntBASIC18.16■□□□□ 0.5
Cux2P70298 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cux2P70298 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms