Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm10434-201ENSMUST00000101158 471 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm11573-201ENSMUST00000119956 394 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm15806-201ENSMUST00000120696 955 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.36□□□□□ -0.91
Lsm5P62322 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.36□□□□□ -0.91
Lsm5P62322 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.36□□□□□ -0.91
Lsm5P62322 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Lsm5P62322 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.36□□□□□ -0.91
Lsm5P62322 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm5P62322 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Lsm5P62322 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.36□□□□□ -0.91
Lsm5P62322 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm5P62322 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lsm5P62322 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm5P62322 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Gm14071-201ENSMUST00000117817 509 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm5P62322 Gm12138-201ENSMUST00000122180 951 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm5P62322 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.35□□□□□ -0.91
Lsm5P62322 Gm25261-201ENSMUST00000157416 134 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.35□□□□□ -0.91
Lsm5P62322 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm5P62322 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm5P62322 Gm8956-201ENSMUST00000203939 825 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Rps4l-202ENSMUST00000204242 789 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm5P62322 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lsm5P62322 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.35□□□□□ -0.91
Lsm5P62322 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.35□□□□□ -0.91
Lsm5P62322 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm5P62322 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms