Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Lsm6P62313 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
Lsm6P62313 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lsm6P62313 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm11244-201ENSMUST00000121243 237 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Gm15329-201ENSMUST00000121408 155 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.95□□□□□ -0.82
Lsm6P62313 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm25732-201ENSMUST00000175168 60 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Gm2517-201ENSMUST00000215651 348 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lsm6P62313 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Lsm6P62313 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Lsm6P62313 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.95□□□□□ -0.82
Lsm6P62313 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lsm6P62313 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Lsm6P62313 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lsm6P62313 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.94□□□□□ -0.82
Lsm6P62313 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.94□□□□□ -0.82
Lsm6P62313 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lsm6P62313 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lsm6P62313 Gm15374-201ENSMUST00000119313 844 ntBASIC9.94□□□□□ -0.82
Lsm6P62313 Gm9089-201ENSMUST00000122027 526 ntBASIC9.94□□□□□ -0.82
Lsm6P62313 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.94□□□□□ -0.82
Lsm6P62313 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lsm6P62313 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.94□□□□□ -0.82
Lsm6P62313 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.94□□□□□ -0.82
Lsm6P62313 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Lsm6P62313 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms