Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.75□□□□□ -0.37
Rrp1P56183 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm22846-201ENSMUST00000157706 270 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rrp1P56183 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm28071-201ENSMUST00000190355 478 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Rrp1P56183 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rrp1P56183 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rrp1P56183 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Rrp1P56183 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rrp1P56183 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Rrp1P56183 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.74□□□□□ -0.37
Rrp1P56183 Gm11573-201ENSMUST00000119956 394 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Gm24749-201ENSMUST00000157838 343 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.74□□□□□ -0.37
Rrp1P56183 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rrp1P56183 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Rrp1P56183 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.74□□□□□ -0.37
Rrp1P56183 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.74□□□□□ -0.37
Rrp1P56183 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rrp1P56183 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rrp1P56183 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.73□□□□□ -0.37
Rrp1P56183 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rrp1P56183 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.73□□□□□ -0.37
Rrp1P56183 Gm14724-201ENSMUST00000118400 537 ntBASIC12.73□□□□□ -0.37
Rrp1P56183 Gm15711-201ENSMUST00000118889 535 ntBASIC12.73□□□□□ -0.37
Rrp1P56183 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.73□□□□□ -0.37
Rrp1P56183 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Gm45433-201ENSMUST00000209386 247 ntBASIC12.73□□□□□ -0.37
Rrp1P56183 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms