Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.07□□□□□ -0.48
NrlP54846 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Gm11700-201ENSMUST00000119409 403 ntBASIC12.07□□□□□ -0.48
NrlP54846 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.07□□□□□ -0.48
NrlP54846 Gm13445-201ENSMUST00000121664 307 ntBASIC12.07□□□□□ -0.48
NrlP54846 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NrlP54846 Gm18201-201ENSMUST00000174735 875 ntBASIC12.07□□□□□ -0.48
NrlP54846 Mir7051-201ENSMUST00000184167 73 ntBASIC12.07□□□□□ -0.48
NrlP54846 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.07□□□□□ -0.48
NrlP54846 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.07□□□□□ -0.48
NrlP54846 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.07□□□□□ -0.48
NrlP54846 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Gm18065-201ENSMUST00000221395 526 ntBASIC12.07□□□□□ -0.48
NrlP54846 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.07□□□□□ -0.48
NrlP54846 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NrlP54846 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NrlP54846 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.07□□□□□ -0.48
NrlP54846 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NrlP54846 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NrlP54846 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NrlP54846 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.06□□□□□ -0.48
NrlP54846 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Gm15036-201ENSMUST00000118880 400 ntBASIC12.06□□□□□ -0.48
NrlP54846 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.06□□□□□ -0.48
NrlP54846 Gm14993-201ENSMUST00000121180 164 ntBASIC12.06□□□□□ -0.48
NrlP54846 Gm25545-201ENSMUST00000122673 323 ntBASIC12.06□□□□□ -0.48
NrlP54846 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.06□□□□□ -0.48
NrlP54846 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.06□□□□□ -0.48
NrlP54846 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NrlP54846 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NrlP54846 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.05□□□□□ -0.48
NrlP54846 Mir453-201ENSMUST00000104732 82 ntBASIC12.05□□□□□ -0.48
NrlP54846 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.05□□□□□ -0.48
NrlP54846 Gm14071-201ENSMUST00000117817 509 ntBASIC12.05□□□□□ -0.48
NrlP54846 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.05□□□□□ -0.48
NrlP54846 Gm15003-201ENSMUST00000118884 446 ntBASIC12.05□□□□□ -0.48
NrlP54846 Mir1905-201ENSMUST00000122779 82 ntBASIC12.05□□□□□ -0.48
NrlP54846 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.05□□□□□ -0.48
NrlP54846 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Gm16030-201ENSMUST00000159098 603 ntBASIC12.05□□□□□ -0.48
NrlP54846 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NrlP54846 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms