Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Ddx6P54823 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ddx6P54823 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ddx6P54823 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ddx6P54823 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ddx6P54823 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ddx6P54823 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm12663-201ENSMUST00000118481 958 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.51□□□□□ -0.57
Ddx6P54823 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm5529-201ENSMUST00000165691 891 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm26989-201ENSMUST00000182608 749 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.51□□□□□ -0.57
Ddx6P54823 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.51□□□□□ -0.57
Ddx6P54823 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Capsl-202ENSMUST00000226688 739 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Gm7589-201ENSMUST00000085631 534 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Btrc-209ENSMUST00000224478 2194 ntBASIC11.51□□□□□ -0.57
Ddx6P54823 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ddx6P54823 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.51□□□□□ -0.57
Ddx6P54823 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ddx6P54823 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.5□□□□□ -0.57
Ddx6P54823 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ddx6P54823 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Ddx6P54823 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ddx6P54823 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ddx6P54823 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ddx6P54823 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.5□□□□□ -0.57
Ddx6P54823 Snord23-201ENSMUST00000116828 109 ntBASIC11.5□□□□□ -0.57
Ddx6P54823 Gm12986-201ENSMUST00000119037 967 ntBASIC11.5□□□□□ -0.57
Ddx6P54823 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.5□□□□□ -0.57
Ddx6P54823 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.5□□□□□ -0.57
Ddx6P54823 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ddx6P54823 Gm5621-201ENSMUST00000187303 640 ntBASIC11.5□□□□□ -0.57
Ddx6P54823 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.5□□□□□ -0.57
Ddx6P54823 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ddx6P54823 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ddx6P54823 Gm8325-201ENSMUST00000099086 453 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms