Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Fdft1P53798 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Fdft1P53798 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Fdft1P53798 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm23200-201ENSMUST00000104379 132 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm12579-201ENSMUST00000118040 783 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm13263-201ENSMUST00000121271 838 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm20495-201ENSMUST00000173902 235 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.31□□□□□ -0.6
Fdft1P53798 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 AU022133-201ENSMUST00000200601 873 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Fdft1P53798 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm4978-201ENSMUST00000071565 801 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fdft1P53798 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Fdft1P53798 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Fdft1P53798 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.31□□□□□ -0.6
Fdft1P53798 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fdft1P53798 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fdft1P53798 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fdft1P53798 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Fdft1P53798 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.3□□□□□ -0.6
Fdft1P53798 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Fdft1P53798 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.3□□□□□ -0.6
Fdft1P53798 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Fdft1P53798 Gm14058-201ENSMUST00000116082 735 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Gm13035-201ENSMUST00000117496 342 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.3□□□□□ -0.6
Fdft1P53798 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fdft1P53798 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.3□□□□□ -0.6
Fdft1P53798 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fdft1P53798 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fdft1P53798 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Fdft1P53798 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.3□□□□□ -0.6
Fdft1P53798 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.29□□□□□ -0.6
Fdft1P53798 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms