Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Srp9P49962 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Srp9P49962 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Srp9P49962 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Srp9P49962 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.63□□□□□ -0.87
Srp9P49962 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.63□□□□□ -0.87
Srp9P49962 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.63□□□□□ -0.87
Srp9P49962 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.62□□□□□ -0.87
Srp9P49962 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Srp9P49962 Rps4l-202ENSMUST00000204242 789 ntBASIC9.62□□□□□ -0.87
Srp9P49962 Gm4157-201ENSMUST00000211647 679 ntBASIC9.62□□□□□ -0.87
Srp9P49962 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.62□□□□□ -0.87
Srp9P49962 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.62□□□□□ -0.87
Srp9P49962 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.62□□□□□ -0.87
Srp9P49962 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Srp9P49962 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.62□□□□□ -0.87
Srp9P49962 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Srp9P49962 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Srp9P49962 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Srp9P49962 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Srp9P49962 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Srp9P49962 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Srp9P49962 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.61□□□□□ -0.87
Srp9P49962 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Gm13996-201ENSMUST00000118456 430 ntBASIC9.61□□□□□ -0.87
Srp9P49962 Gm15004-201ENSMUST00000119192 630 ntBASIC9.61□□□□□ -0.87
Srp9P49962 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.61□□□□□ -0.87
Srp9P49962 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.61□□□□□ -0.87
Srp9P49962 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.61□□□□□ -0.87
Srp9P49962 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.61□□□□□ -0.87
Srp9P49962 Gm45433-201ENSMUST00000209386 247 ntBASIC9.61□□□□□ -0.87
Srp9P49962 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Srp9P49962 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.61□□□□□ -0.87
Srp9P49962 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Srp9P49962 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Srp9P49962 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.61□□□□□ -0.87
Srp9P49962 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms