Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Rfx3P48381 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rfx3P48381 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Rfx3P48381 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rfx3P48381 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rfx3P48381 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rfx3P48381 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Rfx3P48381 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Rfx3P48381 Mir3102-201ENSMUST00000175555 104 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Gm18827-201ENSMUST00000188341 790 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Gm7003-201ENSMUST00000195089 312 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rfx3P48381 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.23□□□□□ -0.77
Rfx3P48381 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Rfx3P48381 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rfx3P48381 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Gm11783-201ENSMUST00000119549 885 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms