Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Gli1P47806 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Gli1P47806 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.07□□□□□ -0.64
Gli1P47806 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.07□□□□□ -0.64
Gli1P47806 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gli1P47806 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.06□□□□□ -0.64
Gli1P47806 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Gli1P47806 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Gm22133-201ENSMUST00000102082 109 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gli1P47806 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.06□□□□□ -0.64
Gli1P47806 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Mir7677-201ENSMUST00000184226 67 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.06□□□□□ -0.64
Gli1P47806 Gm8285-201ENSMUST00000208293 759 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Gm17827-201ENSMUST00000211825 742 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Gli1P47806 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.06□□□□□ -0.64
Gli1P47806 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.06□□□□□ -0.64
Gli1P47806 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.06□□□□□ -0.64
Gli1P47806 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gli1P47806 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gli1P47806 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Gli1P47806 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gli1P47806 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.05□□□□□ -0.64
Gli1P47806 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.05□□□□□ -0.64
Gli1P47806 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.05□□□□□ -0.64
Gli1P47806 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.05□□□□□ -0.64
Gli1P47806 Gm25881-201ENSMUST00000157783 103 ntBASIC11.05□□□□□ -0.64
Gli1P47806 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.05□□□□□ -0.64
Gli1P47806 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.05□□□□□ -0.64
Gli1P47806 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Gm43916-201ENSMUST00000205062 967 ntBASIC11.05□□□□□ -0.64
Gli1P47806 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.05□□□□□ -0.64
Gli1P47806 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms