Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm13392-201ENSMUST00000117708 150 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm11663-201ENSMUST00000117888 290 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm13665-201ENSMUST00000120830 528 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm8815-201ENSMUST00000173809 620 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm27516-201ENSMUST00000184237 98 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm38151-201ENSMUST00000195085 289 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm38317-201ENSMUST00000195564 343 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm18038-201ENSMUST00000197900 485 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm45865-201ENSMUST00000211815 945 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm6722-201ENSMUST00000221586 390 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm270-201ENSMUST00000223010 976 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.56□□□□□ -0.88
Hist1h1dP43277 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hist1h1dP43277 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.55□□□□□ -0.88
Hist1h1dP43277 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.55□□□□□ -0.88
Hist1h1dP43277 Gm42867-201ENSMUST00000202995 469 ntBASIC9.55□□□□□ -0.88
Hist1h1dP43277 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.55□□□□□ -0.88
Hist1h1dP43277 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hist1h1dP43277 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms