Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.77□□□□□ -0.69
Cdx2P43241 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.77□□□□□ -0.69
Cdx2P43241 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Gm5449-201ENSMUST00000081132 357 ntBASIC10.77□□□□□ -0.69
Cdx2P43241 Pck2-205ENSMUST00000226352 2784 ntBASIC10.77□□□□□ -0.69
Cdx2P43241 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cdx2P43241 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdx2P43241 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cdx2P43241 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm23745-201ENSMUST00000104230 125 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.76□□□□□ -0.69
Cdx2P43241 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Gm25569-201ENSMUST00000157175 131 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.76□□□□□ -0.69
Cdx2P43241 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Snord55-201ENSMUST00000174939 79 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Gm20781-201ENSMUST00000193154 693 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Gm6606-201ENSMUST00000193613 947 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Gm21736-201ENSMUST00000195399 693 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.76□□□□□ -0.69
Cdx2P43241 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm6478-201ENSMUST00000099450 742 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.76□□□□□ -0.69
Cdx2P43241 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdx2P43241 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdx2P43241 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Cdx2P43241 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Gm13204-201ENSMUST00000120110 821 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Gm11952-201ENSMUST00000121172 821 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm9625-201ENSMUST00000180422 955 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Gm42751-201ENSMUST00000198065 559 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.75□□□□□ -0.69
Cdx2P43241 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms