Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 AC153566.1-201ENSMUST00000216441 2057 ntBASIC11.63□□□□□ -0.55
HttP42859 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
HttP42859 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
HttP42859 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Gm12362-201ENSMUST00000121986 342 ntBASIC11.62□□□□□ -0.55
HttP42859 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HttP42859 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HttP42859 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HttP42859 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC11.62□□□□□ -0.55
HttP42859 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Mir6909-201ENSMUST00000184212 62 ntBASIC11.62□□□□□ -0.55
HttP42859 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HttP42859 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HttP42859 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 AC154640.1-203ENSMUST00000228316 1618 ntBASIC11.62□□□□□ -0.55
HttP42859 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.62□□□□□ -0.55
HttP42859 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.62□□□□□ -0.55
HttP42859 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.62□□□□□ -0.55
HttP42859 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Gm23521-201ENSMUST00000177845 110 ntBASIC11.62□□□□□ -0.55
HttP42859 Gm26913-201ENSMUST00000182391 732 ntBASIC11.62□□□□□ -0.55
HttP42859 Gm28179-201ENSMUST00000188365 613 ntBASIC11.62□□□□□ -0.55
HttP42859 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.62□□□□□ -0.55
HttP42859 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HttP42859 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.62□□□□□ -0.55
HttP42859 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HttP42859 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Btrc-209ENSMUST00000224478 2194 ntBASIC11.61□□□□□ -0.55
HttP42859 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.61□□□□□ -0.55
HttP42859 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC11.61□□□□□ -0.55
HttP42859 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC11.61□□□□□ -0.55
HttP42859 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
HttP42859 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC11.61□□□□□ -0.55
HttP42859 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
HttP42859 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.61□□□□□ -0.55
HttP42859 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.61□□□□□ -0.55
HttP42859 Gm4865-201ENSMUST00000196284 1309 ntBASIC11.61□□□□□ -0.55
HttP42859 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HttP42859 Gm11652-201ENSMUST00000117842 1267 ntBASIC11.61□□□□□ -0.55
HttP42859 Gm14276-201ENSMUST00000117941 720 ntBASIC11.61□□□□□ -0.55
HttP42859 Gm11700-201ENSMUST00000119409 403 ntBASIC11.61□□□□□ -0.55
HttP42859 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC11.61□□□□□ -0.55
HttP42859 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC11.61□□□□□ -0.55
HttP42859 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.61□□□□□ -0.55
HttP42859 Gm4953-201ENSMUST00000077309 483 ntBASIC11.61□□□□□ -0.55
HttP42859 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HttP42859 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HttP42859 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.6□□□□□ -0.55
HttP42859 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC11.6□□□□□ -0.55
HttP42859 Gm27953-201ENSMUST00000185171 143 ntBASIC11.6□□□□□ -0.55
HttP42859 Gm38004-201ENSMUST00000192972 357 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms