Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cxcl12P40224 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm12345-201ENSMUST00000119288 898 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm29543-201ENSMUST00000188138 967 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm43564-201ENSMUST00000196185 211 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm7880-201ENSMUST00000203748 871 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Cxcl12P40224 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.65□□□□□ -0.55
Cxcl12P40224 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl12P40224 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm11380-201ENSMUST00000118067 560 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm15617-201ENSMUST00000118973 771 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm12745-201ENSMUST00000121767 214 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm17782-201ENSMUST00000174345 880 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm27316-201ENSMUST00000184884 277 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.64□□□□□ -0.55
Cxcl12P40224 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.64□□□□□ -0.55
Cxcl12P40224 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm5278-201ENSMUST00000055957 552 ntBASIC11.64□□□□□ -0.55
Cxcl12P40224 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cxcl12P40224 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl12P40224 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.63□□□□□ -0.55
Cxcl12P40224 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.63□□□□□ -0.55
Cxcl12P40224 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl12P40224 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms