Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm44159-201ENSMUST00000204065 442 ntBASIC16.58■□□□□ 0.24
Chd1P40201 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC16.58■□□□□ 0.24
Chd1P40201 Gm3889-201ENSMUST00000212467 612 ntBASIC16.58■□□□□ 0.24
Chd1P40201 AC134607.1-201ENSMUST00000214707 485 ntBASIC16.58■□□□□ 0.24
Chd1P40201 AC102569.1-201ENSMUST00000221563 685 ntBASIC16.58■□□□□ 0.24
Chd1P40201 CT025547.1-201ENSMUST00000225127 578 ntBASIC16.58■□□□□ 0.24
Chd1P40201 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chd1P40201 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chd1P40201 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd1P40201 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Gm6317-201ENSMUST00000183159 1000 ntBASIC16.57■□□□□ 0.24
Chd1P40201 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd1P40201 BC002189-201ENSMUST00000195674 598 ntBASIC16.57■□□□□ 0.24
Chd1P40201 Gm29803-201ENSMUST00000205069 375 ntBASIC16.57■□□□□ 0.24
Chd1P40201 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Chd1P40201 Gm26205-201ENSMUST00000082907 134 ntBASIC16.57■□□□□ 0.24
Chd1P40201 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1P40201 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.57■□□□□ 0.24
Chd1P40201 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd1P40201 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Gm14021-201ENSMUST00000117683 961 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chd1P40201 Gm43833-201ENSMUST00000198828 293 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Gm18749-201ENSMUST00000222410 692 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Gm43127-201ENSMUST00000195890 2789 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd1P40201 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd1P40201 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Chd1P40201 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Gm12011-201ENSMUST00000119734 618 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Gm12362-201ENSMUST00000121986 342 ntBASIC16.56■□□□□ 0.24
Chd1P40201 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd1P40201 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Gm24146-201ENSMUST00000082760 321 ntBASIC16.56■□□□□ 0.24
Chd1P40201 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1P40201 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Gm5910-201ENSMUST00000211819 1746 ntBASIC16.55■□□□□ 0.24
Chd1P40201 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chd1P40201 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd1P40201 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd1P40201 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd1P40201 Gm28381-201ENSMUST00000188403 193 ntBASIC16.55■□□□□ 0.24
Chd1P40201 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd1P40201 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd1P40201 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chd1P40201 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1P40201 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Chd1P40201 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms