Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.96□□□□□ -0.33
Vcam1P29533 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm26272-201ENSMUST00000179241 132 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Gm5870-201ENSMUST00000196461 282 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Gm42433-201ENSMUST00000196806 940 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm7880-201ENSMUST00000203748 871 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.96□□□□□ -0.33
Vcam1P29533 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.96□□□□□ -0.34
Vcam1P29533 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcam1P29533 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcam1P29533 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcam1P29533 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcam1P29533 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vcam1P29533 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Vcam1P29533 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Vcam1P29533 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.95□□□□□ -0.34
Vcam1P29533 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 Gm11996-201ENSMUST00000117538 915 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Gm12712-201ENSMUST00000120676 801 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.95□□□□□ -0.34
Vcam1P29533 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.95□□□□□ -0.34
Vcam1P29533 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Gm18014-201ENSMUST00000183369 817 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Gm37852-201ENSMUST00000193027 350 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Gm6855-201ENSMUST00000206307 790 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.95□□□□□ -0.34
Vcam1P29533 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Vcam1P29533 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.95□□□□□ -0.34
Vcam1P29533 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vcam1P29533 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcam1P29533 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.94□□□□□ -0.34
Vcam1P29533 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.94□□□□□ -0.34
Vcam1P29533 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.94□□□□□ -0.34
Vcam1P29533 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm25677-201ENSMUST00000174983 72 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Mir6923-201ENSMUST00000184592 72 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm43778-201ENSMUST00000199438 199 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Gm43969-201ENSMUST00000204833 535 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms