Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Btrc-206ENSMUST00000224102 3037 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Gm11439-201ENSMUST00000118598 409 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.67□□□□□ -0.7
Clk1P22518 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Clk1P22518 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm4310-201ENSMUST00000177847 889 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm2383-201ENSMUST00000181461 807 ntBASIC10.67□□□□□ -0.7
Clk1P22518 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Mir8093-201ENSMUST00000185043 137 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm28937-201ENSMUST00000185413 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm29400-201ENSMUST00000187208 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm28662-201ENSMUST00000188446 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm28251-201ENSMUST00000188835 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm37318-201ENSMUST00000194325 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm38017-201ENSMUST00000194768 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm7003-201ENSMUST00000195089 312 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm37287-201ENSMUST00000195449 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm37793-201ENSMUST00000195548 695 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.67□□□□□ -0.7
Clk1P22518 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Gm18065-201ENSMUST00000221395 526 ntBASIC10.67□□□□□ -0.7
Clk1P22518 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Clk1P22518 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.67□□□□□ -0.7
Clk1P22518 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.67□□□□□ -0.7
Clk1P22518 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Clk1P22518 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Gm11960-201ENSMUST00000122068 925 ntBASIC10.66□□□□□ -0.7
Clk1P22518 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Clk1P22518 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Gm25881-201ENSMUST00000157783 103 ntBASIC10.66□□□□□ -0.7
Clk1P22518 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Gm4482-201ENSMUST00000200876 742 ntBASIC10.66□□□□□ -0.7
Clk1P22518 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Mir433-201ENSMUST00000093564 124 ntBASIC10.66□□□□□ -0.7
Clk1P22518 Gm21811-201ENSMUST00000096485 930 ntBASIC10.66□□□□□ -0.7
Clk1P22518 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Clk1P22518 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Clk1P22518 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clk1P22518 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms