Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm27627-201ENSMUST00000183644 150 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Mir8093-201ENSMUST00000185043 137 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm29615-201ENSMUST00000185371 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28224-201ENSMUST00000186078 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm29001-201ENSMUST00000186177 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28292-201ENSMUST00000186593 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28101-201ENSMUST00000187608 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm29076-201ENSMUST00000187689 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28302-201ENSMUST00000187931 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28646-201ENSMUST00000188220 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28205-201ENSMUST00000189177 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm29032-201ENSMUST00000189797 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm28695-201ENSMUST00000190300 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm37448-201ENSMUST00000192795 697 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm22042-201ENSMUST00000082989 165 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm26110-201ENSMUST00000083971 165 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm45769-201ENSMUST00000204588 1828 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
BdnfP21237 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC10.9□□□□□ -0.67
BdnfP21237 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
BdnfP21237 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
BdnfP21237 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
BdnfP21237 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
BdnfP21237 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.9□□□□□ -0.67
BdnfP21237 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
BdnfP21237 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
BdnfP21237 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
BdnfP21237 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
BdnfP21237 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
BdnfP21237 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
BdnfP21237 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.89□□□□□ -0.67
BdnfP21237 Gm4310-201ENSMUST00000177847 889 ntBASIC10.89□□□□□ -0.67
BdnfP21237 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.89□□□□□ -0.67
BdnfP21237 Gm28686-201ENSMUST00000187404 609 ntBASIC10.89□□□□□ -0.67
BdnfP21237 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
BdnfP21237 Gm4157-201ENSMUST00000211647 679 ntBASIC10.89□□□□□ -0.67
BdnfP21237 Gm2553-201ENSMUST00000215986 605 ntBASIC10.89□□□□□ -0.67
BdnfP21237 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.89□□□□□ -0.67
BdnfP21237 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.89□□□□□ -0.67
BdnfP21237 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
BdnfP21237 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.89□□□□□ -0.67
BdnfP21237 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
BdnfP21237 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
BdnfP21237 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms