Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm24992-201ENSMUST00000157412 130 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Mir8115-201ENSMUST00000184992 119 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm37284-201ENSMUST00000193607 539 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm5302-201ENSMUST00000202130 796 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Igh-VJ558P01758 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm23272-201ENSMUST00000104053 129 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm8302-201ENSMUST00000119217 852 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm24074-201ENSMUST00000158178 260 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm23045-201ENSMUST00000175041 96 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm5451-201ENSMUST00000080545 579 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Igh-VJ558P01758 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms