Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
Slc1a6O35544 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm15617-201ENSMUST00000118973 771 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm38151-201ENSMUST00000195085 289 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm5714-201ENSMUST00000197343 566 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 AY036118-201ENSMUST00000200021 923 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm5302-201ENSMUST00000202130 796 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm45856-201ENSMUST00000212752 416 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm6722-201ENSMUST00000221586 390 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.12□□□□□ -0.63
Slc1a6O35544 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Slc1a6O35544 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc1a6O35544 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm14127-201ENSMUST00000117906 678 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Olfml3-204ENSMUST00000169286 874 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm27572-201ENSMUST00000183702 255 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm18062-201ENSMUST00000208020 547 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm18055-201ENSMUST00000208254 547 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm270-201ENSMUST00000223010 976 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc1a6O35544 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.11□□□□□ -0.63
Slc1a6O35544 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc1a6O35544 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc1a6O35544 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc1a6O35544 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc1a6O35544 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms