Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm13045-201ENSMUST00000119019 712 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Mir8115-201ENSMUST00000184992 119 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm37981-201ENSMUST00000194280 535 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm9555-201ENSMUST00000200908 583 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm18056-201ENSMUST00000207670 568 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm18061-201ENSMUST00000208350 562 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm18063-201ENSMUST00000208529 568 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm18052-201ENSMUST00000208750 559 ntBASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chrna9G3X8Z7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Mir1896-201ENSMUST00000122641 81 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm22144-201ENSMUST00000157402 102 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Mir7686-201ENSMUST00000200604 57 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm19208-201ENSMUST00000213861 912 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chrna9G3X8Z7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chrna9G3X8Z7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms