Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Gm26313-201ENSMUST00000157770 308 ntBASIC13.67□□□□□ -0.22
NpcdF8VQB8 Gm24294-201ENSMUST00000158295 277 ntBASIC13.67□□□□□ -0.22
NpcdF8VQB8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.67□□□□□ -0.22
NpcdF8VQB8 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.67□□□□□ -0.22
NpcdF8VQB8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.67□□□□□ -0.22
NpcdF8VQB8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NpcdF8VQB8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.66□□□□□ -0.22
NpcdF8VQB8 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm4775-201ENSMUST00000169588 402 ntBASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm7572-201ENSMUST00000182616 766 ntBASIC13.66□□□□□ -0.22
NpcdF8VQB8 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm9102-201ENSMUST00000219250 465 ntBASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.66□□□□□ -0.22
NpcdF8VQB8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NpcdF8VQB8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm15815-201ENSMUST00000120569 255 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm5529-201ENSMUST00000165691 891 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms