Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 BC080696-201ENSMUST00000202858 1218 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syngap1F6SEU4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm23769-201ENSMUST00000104441 121 ntBASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm12345-201ENSMUST00000119288 898 ntBASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm13281-201ENSMUST00000120871 567 ntBASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Gm23105-201ENSMUST00000083719 134 ntBASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syngap1F6SEU4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syngap1F6SEU4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm11244-201ENSMUST00000121243 237 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms