Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm15528-201ENSMUST00000117821 864 ntBASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm12990-201ENSMUST00000120372 468 ntBASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.21□□□□□ -0.61
Srp54bE9PXC0 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.21□□□□□ -0.62
Srp54bE9PXC0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm24992-201ENSMUST00000157412 130 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm7593-201ENSMUST00000187246 644 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm18514-201ENSMUST00000218980 436 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srp54bE9PXC0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms