Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3bQ9ES34 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm22709-201ENSMUST00000116893 111 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm15197-201ENSMUST00000120526 478 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3bQ9ES34 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm25063-201ENSMUST00000104666 94 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm15074-201ENSMUST00000117603 936 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.51□□□□□ -0.25
Ube3bQ9ES34 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Gm12795-201ENSMUST00000117594 539 ntBASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Gm12463-201ENSMUST00000118271 849 ntBASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.5□□□□□ -0.25
Ube3bQ9ES34 Gm12791-201ENSMUST00000120788 655 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms