Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.85□□□□□ -0.67
Ube4bQ9ES00 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm6023-201ENSMUST00000118217 606 ntBASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm11960-201ENSMUST00000122068 925 ntBASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm37201-201ENSMUST00000191845 523 ntBASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube4bQ9ES00 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Ube4bQ9ES00 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Gm6114-201ENSMUST00000182472 968 ntBASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms