Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm13022-201ENSMUST00000121181 285 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm11980-201ENSMUST00000121445 986 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm24992-201ENSMUST00000157412 130 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm7082-201ENSMUST00000209880 969 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Gm4604-201ENSMUST00000025040 390 ntBASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim54Q9ERP3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm12791-201ENSMUST00000120788 655 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm9081-201ENSMUST00000182346 991 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm44323-201ENSMUST00000198689 129 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Gm25201-201ENSMUST00000083093 170 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Rgr-203ENSMUST00000225070 4704 ntBASIC12.29□□□□□ -0.44
Trim54Q9ERP3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim54Q9ERP3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm13351-201ENSMUST00000118087 414 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm15197-201ENSMUST00000120526 478 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms