Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf6Q9DBU5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Rnf6Q9DBU5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf6Q9DBU5 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf6Q9DBU5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf6Q9DBU5 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm15528-201ENSMUST00000117821 864 ntBASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm19246-201ENSMUST00000173599 255 ntBASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm29067-201ENSMUST00000190821 470 ntBASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf6Q9DBU5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Snord17-201ENSMUST00000104526 238 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm11949-201ENSMUST00000117640 372 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm15573-201ENSMUST00000119487 540 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm14395-201ENSMUST00000120494 563 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm23105-201ENSMUST00000083719 134 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf6Q9DBU5 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms