Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm11500-201ENSMUST00000118237 601 ntBASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm2260-201ENSMUST00000184965 657 ntBASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp4cQ9D7F7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm12579-201ENSMUST00000118040 783 ntBASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm12196-201ENSMUST00000120954 262 ntBASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm6867-201ENSMUST00000219165 425 ntBASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp4cQ9D7F7 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gm10829-201ENSMUST00000202084 2988 ntBASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gm8566-201ENSMUST00000120174 465 ntBASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms