Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm14201-201ENSMUST00000117627 289 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm12390-201ENSMUST00000117897 397 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm13829-201ENSMUST00000119600 138 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm13316-201ENSMUST00000140537 691 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm24845-201ENSMUST00000158034 109 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm6266-201ENSMUST00000203844 806 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim42Q9D2H5 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm12463-201ENSMUST00000118271 849 ntBASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms