Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm9089-201ENSMUST00000122027 526 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm22144-201ENSMUST00000157402 102 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Mir7686-201ENSMUST00000200604 57 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm42867-201ENSMUST00000202995 469 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm9062-201ENSMUST00000117712 727 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm11434-201ENSMUST00000122379 629 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Spcs1-203ENSMUST00000226374 592 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.93□□□□□ -0.5
Ddx56Q9D0R4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm11836-201ENSMUST00000121022 441 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm23699-201ENSMUST00000158835 135 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Mir5120-201ENSMUST00000175020 78 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm37981-201ENSMUST00000194280 535 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm9555-201ENSMUST00000200908 583 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.92□□□□□ -0.5
Ddx56Q9D0R4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms