Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Chaf1bQ9D0N7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm5982-201ENSMUST00000196234 512 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm45598-202ENSMUST00000210719 986 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm19309-201ENSMUST00000218295 205 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm5705-201ENSMUST00000066241 711 ntBASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Chaf1bQ9D0N7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm27046-201ENSMUST00000182160 463 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm31256-201ENSMUST00000194705 506 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Olfr284-202ENSMUST00000206647 966 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 AA474408-201ENSMUST00000098110 3339 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms