Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm37060-201ENSMUST00000194997 2397 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm12314-201ENSMUST00000118104 538 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm12459-201ENSMUST00000120659 356 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm13676-201ENSMUST00000122185 591 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm37669-201ENSMUST00000192184 820 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm43044-201ENSMUST00000198091 379 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm43805-201ENSMUST00000198488 824 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm19065-202ENSMUST00000203910 1165 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 AC153526.1-201ENSMUST00000219750 190 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 AC123735.1-201ENSMUST00000227358 605 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 AC099612.1-201ENSMUST00000226318 1636 ntBASIC15.35■□□□□ 0.05
Rtn4Q99P72 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm13742-201ENSMUST00000118805 457 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm14906-201ENSMUST00000119265 390 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm15238-201ENSMUST00000119938 1296 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm23207-201ENSMUST00000158665 102 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm6611-201ENSMUST00000163830 1272 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm4831-201ENSMUST00000174626 594 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm45598-202ENSMUST00000210719 986 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm6841-201ENSMUST00000220602 598 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm3333-202ENSMUST00000221763 1044 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 AC154461.5-201ENSMUST00000225429 774 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 AC131117.2-203ENSMUST00000225886 950 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms