Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm22042-201ENSMUST00000082989 165 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm26110-201ENSMUST00000083971 165 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm12463-201ENSMUST00000118271 849 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm25116-201ENSMUST00000157191 122 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm43179-201ENSMUST00000198797 275 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm45113-201ENSMUST00000207518 165 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm270-201ENSMUST00000223010 976 ntBASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkd1Q99MH6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms