Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm11783-201ENSMUST00000119549 885 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm18827-201ENSMUST00000188341 790 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gm43378-201ENSMUST00000199336 582 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 BC043934-202ENSMUST00000185694 2356 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chmp1b1Q99LU0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm14058-201ENSMUST00000116082 735 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm14724-201ENSMUST00000118400 537 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm8566-201ENSMUST00000120174 465 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Mir7070-201ENSMUST00000183657 86 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chmp1b1Q99LU0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms