Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm24891-201ENSMUST00000104391 136 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm12579-201ENSMUST00000118040 783 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm13461-201ENSMUST00000120980 662 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm8199-201ENSMUST00000121323 823 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm9257-201ENSMUST00000221254 232 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cstf3Q99LI7 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm29499-201ENSMUST00000189151 486 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm28329-201ENSMUST00000191208 689 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm29171-201ENSMUST00000191397 486 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm4857-201ENSMUST00000192718 785 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cstf3Q99LI7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cstf3Q99LI7 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms