Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gm14644-201ENSMUST00000116671 647 ntBASIC11.41□□□□□ -0.58
Cdk9Q99J95 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.41□□□□□ -0.58
Cdk9Q99J95 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm24255-201ENSMUST00000104481 128 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm14381-201ENSMUST00000122105 414 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm26956-201ENSMUST00000182176 986 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm9257-201ENSMUST00000221254 232 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm10312-201ENSMUST00000078515 489 ntBASIC11.4□□□□□ -0.58
Cdk9Q99J95 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdk9Q99J95 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdk9Q99J95 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdk9Q99J95 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdk9Q99J95 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Cdk9Q99J95 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdk9Q99J95 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Cdk9Q99J95 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.4□□□□□ -0.59
Cdk9Q99J95 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdk9Q99J95 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdk9Q99J95 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdk9Q99J95 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdk9Q99J95 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdk9Q99J95 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdk9Q99J95 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms