Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm8885-201ENSMUST00000189382 598 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm9353-201ENSMUST00000200472 604 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm9797-202ENSMUST00000218003 294 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm20495-201ENSMUST00000173902 235 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm37301-201ENSMUST00000195412 568 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Olfr284-202ENSMUST00000206647 966 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm44651-201ENSMUST00000207343 372 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm17827-201ENSMUST00000211825 742 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Gm45880-201ENSMUST00000213041 853 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Thumpd1Q99J36 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Thumpd1Q99J36 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms