Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb18Q91Y02 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.9□□□□□ -0.51
Pcdhb18Q91Y02 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb18Q91Y02 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb18Q91Y02 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm13351-201ENSMUST00000118087 414 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm25492-201ENSMUST00000157383 129 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb18Q91Y02 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm11700-201ENSMUST00000119409 403 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm20495-201ENSMUST00000173902 235 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm18065-201ENSMUST00000221395 526 ntBASIC11.88□□□□□ -0.51
Pcdhb18Q91Y02 Gm16380-201ENSMUST00000077997 478 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms