Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Mir6923-201ENSMUST00000184592 72 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.95□□□□□ -0.34
Trex1Q91XB0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trex1Q91XB0 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gm12986-201ENSMUST00000119037 967 ntBASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gm11952-201ENSMUST00000121172 821 ntBASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gm5529-201ENSMUST00000165691 891 ntBASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.94□□□□□ -0.34
Trex1Q91XB0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trex1Q91XB0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms