Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim29Q8R2Q0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim29Q8R2Q0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim29Q8R2Q0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim29Q8R2Q0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim29Q8R2Q0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm9089-201ENSMUST00000122027 526 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm2517-201ENSMUST00000215651 348 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim29Q8R2Q0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm15329-201ENSMUST00000121408 155 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm7666-201ENSMUST00000146631 819 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Olfml3-204ENSMUST00000169286 874 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm9353-201ENSMUST00000200472 604 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim29Q8R2Q0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms