Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm18062-201ENSMUST00000208020 547 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm18055-201ENSMUST00000208254 547 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ebf4Q8K4J2 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ebf4Q8K4J2 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ebf4Q8K4J2 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ebf4Q8K4J2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ebf4Q8K4J2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.27□□□□□ -0.76
Ebf4Q8K4J2 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Mir7085-201ENSMUST00000184353 66 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ebf4Q8K4J2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms