Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm13263-201ENSMUST00000121271 838 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm5714-201ENSMUST00000197343 566 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm3786-201ENSMUST00000202659 378 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm8959-201ENSMUST00000213150 571 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Ginm1-202ENSMUST00000065124 300 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.43□□□□□ -0.58
Clip4Q8CI96 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clip4Q8CI96 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm13408-201ENSMUST00000119822 798 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm15432-201ENSMUST00000121106 195 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm13935-201ENSMUST00000121859 798 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm22902-201ENSMUST00000158488 302 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm9192-201ENSMUST00000183221 985 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm6450-201ENSMUST00000200896 574 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.42□□□□□ -0.58
Clip4Q8CI96 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clip4Q8CI96 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.42□□□□□ -0.58
Clip4Q8CI96 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.41□□□□□ -0.58
Clip4Q8CI96 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms