Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc28bQ8CEG5 Gm5705-201ENSMUST00000066241 711 ntBASIC11.21□□□□□ -0.61
Ccdc28bQ8CEG5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc28bQ8CEG5 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccdc28bQ8CEG5 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Spata33-207ENSMUST00000212760 4074 ntBASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm15547-201ENSMUST00000122152 333 ntBASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm6963-201ENSMUST00000147879 379 ntBASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm5070-201ENSMUST00000177599 862 ntBASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm8602-201ENSMUST00000184045 607 ntBASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc28bQ8CEG5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm14071-201ENSMUST00000117817 509 ntBASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm13786-201ENSMUST00000122371 333 ntBASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Gm19309-201ENSMUST00000218295 205 ntBASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms