Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup88Q8CEC0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm37580-201ENSMUST00000192408 2800 ntBASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm22138-201ENSMUST00000158748 128 ntBASIC13.38□□□□□ -0.27
Nup88Q8CEC0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm4310-201ENSMUST00000177847 889 ntBASIC13.38□□□□□ -0.27
Nup88Q8CEC0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.38□□□□□ -0.27
Nup88Q8CEC0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup88Q8CEC0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm22920-201ENSMUST00000102175 109 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm22711-201ENSMUST00000116890 133 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm11628-201ENSMUST00000117568 171 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm23045-201ENSMUST00000175041 96 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm9358-201ENSMUST00000183067 927 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup88Q8CEC0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC13.36□□□□□ -0.27
Nup88Q8CEC0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup88Q8CEC0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms